RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01490.1 View Network Show in Genome Browser |
| Other Names | Os06g0104300 |
| Description | monocopper oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 297160-301812 Nucleotide Length: 1782 |
| Protein-coding | LOC_Os06g01490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03530 LOC_Os03g08790 LOC_Os03g03360 LOC_Os03g55930 LOC_Os02g15690 LOC_Os05g31280 LOC_Os04g20810 LOC_Os03g64030 LOC_Os05g47850 LOC_Os05g45930 LOC_Os04g44440 More.. |
| Downstream Genes | LOC_Os07g32660 LOC_Os07g01490 LOC_Os08g25900 LOC_Os09g32250 LOC_Os06g21530 LOC_Os10g41430 LOC_Os07g43350 LOC_Os07g47990 LOC_Os12g02550 LOC_Os11g02630 LOC_Os06g20320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01490.1 |
| Rice Genome Annotation | LOC_Os06g01490.1 |
| Ricechip | LOC_Os06g01490.1 |
| KEGG | osa:4339854 dosa:Os06t0104300-01 |
| Entrez-Gene | 4339854 |