RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01500.3 View Network Show in Genome Browser |
| Other Names | Os06g0104400 |
| Description | IQ calmodulin-binding motif family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 305994-308754 Nucleotide Length: 1293 |
| Protein-coding | LOC_Os06g01500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70100 LOC_Os05g45930 LOC_Os01g73160 LOC_Os01g32800 LOC_Os02g09140 LOC_Os01g42650 |
| Downstream Genes | LOC_Os09g32250 LOC_Os09g34960 LOC_Os10g42110 LOC_Os12g35290 LOC_Os07g48920 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01500.3 |
| Rice Genome Annotation | LOC_Os06g01500.3 |
| Ricechip | LOC_Os06g01500.3 |
| KEGG | osa:4339855 dosa:Os06t0104400-01 |
| Entrez-Gene | 4339855 |