RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g01590.1 View Network Show in Genome Browser
Other Names	Os06g0104900
Description	lactate/malate dehydrogenase, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 346985-348516 Nucleotide Length: 1083
Protein-coding	LOC_Os06g01590

Gene Ontology Classification
GO	Name	Type	Code
GO:0008152	metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g67860 LOC_Os04g50990 LOC_Os02g47140 LOC_Os01g61380 LOC_Os01g46070 LOC_Os05g49880 LOC_Os05g33380 LOC_Os05g51700 LOC_Os03g56280 LOC_Os05g40820 LOC_Os03g50620 More..
Downstream Genes	LOC_Os06g40640 LOC_Os07g10660 LOC_Os07g12250 LOC_Os08g33720 LOC_Os12g43630 LOC_Os07g43700 LOC_Os10g08022 LOC_Os11g05562 LOC_Os08g44480 LOC_Os09g39540 LOC_Os07g15880 More..

miRNA Regulations
miRNAs	osa-miR531b osa-miR5075

Pathways
KEGG Pathways	rn00010 rn00620 rn01100 rn01110 rn01120 rn00270 rn00640
Metacyc Pathways	P124-PWY ANAEROFRUCAT-PWY PWY-3801

Database Links
Gramene	LOC_Os06g01590.1
Rice Genome Annotation	LOC_Os06g01590.1
Ricechip	LOC_Os06g01590.1
KEGG	osa:4339856 dosa:Os06t0104900-01
Entrez-Gene	4339856