RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01630.1 View Network Show in Genome Browser |
| Other Names | Os06g0105400 |
| Description | 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 370059-374997 Nucleotide Length: 1653 |
| Protein-coding | LOC_Os06g01630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50620 LOC_Os03g44300 LOC_Os04g02900 LOC_Os01g22520 LOC_Os05g06750 LOC_Os02g10070 LOC_Os02g07410 LOC_Os04g32020 LOC_Os04g58110 LOC_Os02g13840 LOC_Os05g22940 More.. |
| Downstream Genes | LOC_Os08g42410 LOC_Os09g33500 LOC_Os06g13720 LOC_Os12g42230 LOC_Os06g30460 LOC_Os11g33240 LOC_Os10g37180 LOC_Os07g49520 LOC_Os07g44330 LOC_Os10g21910 LOC_Os06g45670 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00020 rn00620 rn01110 rn01120 |
| Metacyc Pathways | PYRUVDEHYD-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01630.1 |
| Rice Genome Annotation | LOC_Os06g01630.1 |
| Ricechip | LOC_Os06g01630.1 |
| KEGG | osa:4339859 dosa:Os06t0105400-02 |
| Entrez-Gene | 4339859 |