RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01850.1 View Network Show in Genome Browser |
| Other Names | Os06g0107700 |
| Description | ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 479178-481669 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os06g01850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47020 LOC_Os05g40990 LOC_Os05g42350 LOC_Os02g52730 LOC_Os01g25484 LOC_Os02g01340 LOC_Os05g43310 LOC_Os02g37060 LOC_Os03g63950 LOC_Os04g44830 LOC_Os01g40310 More.. |
| Downstream Genes | LOC_Os08g36480 LOC_Os08g36500 LOC_Os10g37180 LOC_Os08g01380 LOC_Os07g32570 LOC_Os09g30340 LOC_Os11g13890 LOC_Os08g35760 LOC_Os06g46770 LOC_Os12g23180 LOC_Os07g01760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01850.1 |
| Rice Genome Annotation | LOC_Os06g01850.1 |
| Ricechip | LOC_Os06g01850.1 |
| KEGG | osa:4339874 dosa:Os06t0107700-01 |
| Entrez-Gene | 4339874 |