RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g01890.1 View Network Show in Genome Browser
Other Names	Os06g0108500
Description	MADS-box transcription factor, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 494850-511406 Nucleotide Length: 642
Protein-coding	LOC_Os06g01890

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g54160 LOC_Os01g55040
Downstream Genes	LOC_Os07g01820 LOC_Os11g40100 LOC_Os12g31350 LOC_Os11g10100 LOC_Os06g08380 LOC_Os09g12800 LOC_Os07g19560 LOC_Os06g27890

Database Links
Gramene	LOC_Os06g01890.1
Rice Genome Annotation	LOC_Os06g01890.1
Ricechip	LOC_Os06g01890.1
KEGG	dosa:Os06t0108500-01