RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01950.1 View Network Show in Genome Browser |
| Other Names | Os06g0109000 |
| Description | phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 530534-532108 Nucleotide Length: 1092 |
| Protein-coding | LOC_Os06g01950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01230 LOC_Os02g51590 LOC_Os03g18310 LOC_Os05g07130 LOC_Os02g07870 |
| Downstream Genes | LOC_Os11g05260 LOC_Os08g37140 LOC_Os09g26180 LOC_Os10g26640 LOC_Os08g14070 LOC_Os12g04120 LOC_Os11g04320 LOC_Os12g04110 LOC_Os06g11960 LOC_Os06g45120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01950.1 |
| Rice Genome Annotation | LOC_Os06g01950.1 |
| Ricechip | LOC_Os06g01950.1 |
| KEGG | osa:4339877 dosa:Os06t0109000-00 |
| Entrez-Gene | 4339877 |