RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02144.2 View Network Show in Genome Browser |
| Other Names | Os06g0111500 |
| Description | 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 643683-646768 Nucleotide Length: 1443 |
| Protein-coding | LOC_Os06g02144 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56460 LOC_Os05g49070 LOC_Os03g30300 LOC_Os03g06740 LOC_Os04g24140 LOC_Os05g51650 LOC_Os05g24550 LOC_Os02g33450 LOC_Os02g38840 LOC_Os03g58340 LOC_Os02g35500 More.. |
| Downstream Genes | LOC_Os09g26880 LOC_Os06g46372 LOC_Os10g11140 LOC_Os06g14510 LOC_Os09g29050 LOC_Os08g37370 LOC_Os07g41280 LOC_Os09g32810 LOC_Os11g29400 LOC_Os06g14740 LOC_Os07g44660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02144.2 |
| Rice Genome Annotation | LOC_Os06g02144.2 |
| Ricechip | LOC_Os06g02144.2 |
| KEGG | osa:4339892 dosa:Os06t0111500-01 |
| Entrez-Gene | 4339892 |