RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02220.1 View Network Show in Genome Browser |
| Other Names | Os06g0112200 |
| Description | MTA/SAH nucleosidase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 692754-695751 Nucleotide Length: 780 |
| Protein-coding | LOC_Os06g02220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02210 LOC_Os05g13970 LOC_Os04g01250 |
| Downstream Genes | LOC_Os08g28230 LOC_Os08g41990 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1319b |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 |
| Metacyc Pathways | PWY-4361 PWY0-1391 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02220.1 |
| Rice Genome Annotation | LOC_Os06g02220.1 |
| Ricechip | LOC_Os06g02220.1 |
| KEGG | osa:4339898 dosa:Os06t0112200-01 |
| Entrez-Gene | 4339898 |