RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02380.2 View Network Show in Genome Browser |
| Other Names | Os06g0114000 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 811034-816534 Nucleotide Length: 1806 |
| Protein-coding | LOC_Os06g02380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54060 LOC_Os03g25050 LOC_Os03g55310 LOC_Os04g51280 LOC_Os03g01830 LOC_Os02g55120 LOC_Os01g08930 LOC_Os02g08380 LOC_Os03g21900 LOC_Os03g40550 LOC_Os05g23740 More.. |
| Downstream Genes | LOC_Os06g09679 LOC_Os09g26730 LOC_Os10g41710 LOC_Os07g44740 LOC_Os06g09688 LOC_Os12g17910 LOC_Os06g09717 LOC_Os09g32030 LOC_Os11g02450 LOC_Os12g02380 LOC_Os06g20320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02380.2 |
| Rice Genome Annotation | LOC_Os06g02380.2 |
| Ricechip | LOC_Os06g02380.2 |
| KEGG | osa:4339910 dosa:Os06t0114000-02 |
| Entrez-Gene | 4339910 |