RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02570.1 View Network Show in Genome Browser |
| Other Names | Os06g0116300 |
| Description | syntaxin, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 902497-907096 Nucleotide Length: 993 |
| Protein-coding | LOC_Os06g02570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73230 LOC_Os02g24134 LOC_Os03g57310 LOC_Os01g51120 LOC_Os01g37980 LOC_Os04g13470 LOC_Os05g48020 LOC_Os01g64650 LOC_Os02g10510 LOC_Os03g58840 LOC_Os03g06960 More.. |
| Downstream Genes | LOC_Os11g06740 LOC_Os07g07000 LOC_Os06g39050 LOC_Os07g09600 LOC_Os08g18110 LOC_Os08g43640 LOC_Os09g37000 LOC_Os08g17600 LOC_Os12g35620 LOC_Os12g09089 LOC_Os10g20240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02570.1 |
| Rice Genome Annotation | LOC_Os06g02570.1 |
| Ricechip | LOC_Os06g02570.1 |
| KEGG | osa:4339929 dosa:Os06t0116300-01 |
| Entrez-Gene | 4339929 |