RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02980.1 View Network Show in Genome Browser |
| Other Names | Os06g0120732 |
| Description | ATP synthase F1, epsilon subunit family protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1095472-1096462 Nucleotide Length: 783 |
| Protein-coding | LOC_Os06g02980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58000 LOC_Os03g48471 LOC_Os04g16740 LOC_Os01g08350 LOC_Os02g51470 LOC_Os01g72980 LOC_Os03g02480 LOC_Os03g62750 LOC_Os01g39010 LOC_Os01g59060 LOC_Os03g17070 More.. |
| Downstream Genes | LOC_Os07g31300 LOC_Os10g17280 LOC_Os07g32880 LOC_Os12g19430 LOC_Os06g43850 LOC_Os12g23630 LOC_Os10g21240 LOC_Os09g08910 LOC_Os09g08880 LOC_Os11g03900 LOC_Os12g03720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02980.1 |
| Rice Genome Annotation | LOC_Os06g02980.1 |
| Ricechip | LOC_Os06g02980.1 |
| KEGG | dosa:Os06t0120732-00 |