RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g03640.1 View Network Show in Genome Browser |
| Other Names | Os06g0126500 |
| Description | BAG domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1414221-1416618 Nucleotide Length: 1020 |
| Protein-coding | LOC_Os06g03640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32110 LOC_Os05g48900 LOC_Os03g52630 LOC_Os05g03174 LOC_Os05g08370 LOC_Os05g06720 LOC_Os02g15230 LOC_Os03g20760 LOC_Os05g38720 LOC_Os04g59330 LOC_Os01g67240 More.. |
| Downstream Genes | LOC_Os07g10770 LOC_Os07g27810 LOC_Os07g14850 LOC_Os12g25690 LOC_Os07g43990 LOC_Os08g35710 LOC_Os08g06380 LOC_Os09g32080 LOC_Os07g24190 LOC_Os07g06680 LOC_Os06g44620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g03640.1 |
| Rice Genome Annotation | LOC_Os06g03640.1 |
| Ricechip | LOC_Os06g03640.1 |
| KEGG | osa:4339971 dosa:Os06t0126500-01 |
| Entrez-Gene | 4339971 |