RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g03720.1 View Network Show in Genome Browser
Other Names	Os06g0127900
Description	ribonucleoside-diphosphate reductase small chain, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 1470865-1472141 Nucleotide Length: 1038
Protein-coding	LOC_Os06g03720

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0008219	cell death	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g56100 LOC_Os02g03060 LOC_Os05g31770 LOC_Os05g29010 LOC_Os03g02680 LOC_Os03g01850 LOC_Os04g51920 LOC_Os03g29240 LOC_Os02g56130 LOC_Os01g72280 LOC_Os03g05300 More..
Downstream Genes	LOC_Os06g07210 LOC_Os12g07720 LOC_Os11g40150 LOC_Os12g06200 LOC_Os06g44880 LOC_Os07g08330 LOC_Os07g44630 LOC_Os07g09330 LOC_Os07g32480 LOC_Os12g31370 LOC_Os11g26850 More..

Pathways
KEGG Pathways	rn00240 rn01100 rn00230 rn00480
Metacyc Pathways	PWY0-166

Reference
PubMed	19297585

Database Links
Gramene	LOC_Os06g03720.1
Rice Genome Annotation	LOC_Os06g03720.1
Ricechip	LOC_Os06g03720.1
KEGG	osa:4339981 dosa:Os06t0127900-01
Entrez-Gene	4339981