RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g03790.1 View Network Show in Genome Browser |
| Other Names | Os06g0128500 |
| Description | 39S ribosomal protein L47, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1512795-1516434 Nucleotide Length: 438 |
| Protein-coding | LOC_Os06g03790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38580 LOC_Os01g62210 LOC_Os03g03360 LOC_Os04g25540 LOC_Os02g51790 LOC_Os01g54540 LOC_Os02g30050 LOC_Os01g14830 LOC_Os04g41300 LOC_Os03g56800 LOC_Os03g54040 More.. |
| Downstream Genes | LOC_Os06g35470 LOC_Os08g21840 LOC_Os08g31228 LOC_Os08g31219 LOC_Os09g19954 LOC_Os06g19640 LOC_Os08g15030 LOC_Os07g36090 LOC_Os08g16130 LOC_Os10g02630 LOC_Os12g42180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g03790.1 |
| Rice Genome Annotation | LOC_Os06g03790.1 |
| Ricechip | LOC_Os06g03790.1 |
| KEGG | osa:4339986 dosa:Os06t0128500-01 |
| Entrez-Gene | 4339986 |