RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g03930.1 View Network Show in Genome Browser |
| Other Names | Os06g0129900 |
| Description | cytochrome P450 86A1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1581991-1585822 Nucleotide Length: 1578 |
| Protein-coding | LOC_Os06g03930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g40600 LOC_Os05g30890 LOC_Os03g25490 LOC_Os01g41800 LOC_Os01g43760 LOC_Os05g33590 LOC_Os03g29760 LOC_Os01g50590 LOC_Os03g39540 LOC_Os02g36030 LOC_Os04g03870 More.. |
| Downstream Genes | LOC_Os07g45000 LOC_Os07g34520 LOC_Os09g08920 LOC_Os12g02630 LOC_Os07g23710 LOC_Os06g43480 LOC_Os11g29720 LOC_Os09g27500 LOC_Os06g37224 LOC_Os06g37364 LOC_Os07g26870 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g03930.1 |
| Rice Genome Annotation | LOC_Os06g03930.1 |
| Ricechip | LOC_Os06g03930.1 |
| KEGG | osa:4339998 dosa:Os06t0129900-01 |
| Entrez-Gene | 4339998 |