RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g03970.1 View Network Show in Genome Browser |
| Other Names | Os06g0130100 |
| Description | receptor-like protein kinase 5 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1605460-1612409 Nucleotide Length: 3000 |
| Protein-coding | LOC_Os06g03970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os04g56450 LOC_Os02g55560 LOC_Os02g15594 LOC_Os04g37904 LOC_Os04g52000 LOC_Os02g13110 LOC_Os03g18150 LOC_Os01g41630 LOC_Os05g50970 LOC_Os01g19130 More.. |
| Downstream Genes | LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os06g36770 LOC_Os10g39540 LOC_Os08g32650 LOC_Os06g44210 LOC_Os06g33530 LOC_Os09g30100 LOC_Os08g09640 LOC_Os06g38730 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR390-5p |
| Reference | |
|---|---|
| PubMed | 20128882 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g03970.1 |
| Rice Genome Annotation | LOC_Os06g03970.1 |
| Ricechip | LOC_Os06g03970.1 |
| KEGG | osa:4340000 dosa:Os06t0130100-03 |
| Entrez-Gene | 4340000 |