RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04080.2 View Network Show in Genome Browser |
| Other Names | Os06g0131500 |
| Description | glycosyl hydrolases family 17, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1691885-1694140 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os06g04080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46330 LOC_Os01g55040 LOC_Os03g58204 LOC_Os05g41610 LOC_Os01g47070 LOC_Os01g58730 LOC_Os03g19200 LOC_Os03g03610 LOC_Os01g09800 LOC_Os02g54530 LOC_Os05g28750 More.. |
| Downstream Genes | LOC_Os07g08330 LOC_Os06g08380 LOC_Os09g36440 LOC_Os06g51270 LOC_Os10g22570 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04080.2 |
| Rice Genome Annotation | LOC_Os06g04080.2 |
| Ricechip | LOC_Os06g04080.2 |
| KEGG | osa:4340010 dosa:Os06t0131500-01 |
| Entrez-Gene | 4340010 |