RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04190.2 View Network Show in Genome Browser |
| Other Names | Os06g0132600 |
| Description | rad1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1758960-1760884 Nucleotide Length: 891 |
| Protein-coding | LOC_Os06g04190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g13850 LOC_Os03g22450 LOC_Os05g46270 LOC_Os02g45920 LOC_Os05g29760 LOC_Os05g19270 |
| Downstream Genes | LOC_Os09g09470 LOC_Os08g17294 LOC_Os08g19850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04190.2 |
| Rice Genome Annotation | LOC_Os06g04190.2 |
| Ricechip | LOC_Os06g04190.2 |
| KEGG | osa:4340017 dosa:Os06t0132600-02 |
| Entrez-Gene | 4340017 |