RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04250.1 View Network Show in Genome Browser |
| Other Names | Os06g0133600 |
| Description | phosphate-induced protein 1 conserved region domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1789836-1791394 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os06g04250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g22730 LOC_Os02g44630 LOC_Os03g50030 LOC_Os03g50810 LOC_Os03g06350 LOC_Os02g53200 |
| Downstream Genes | LOC_Os06g49100 LOC_Os07g34520 LOC_Os06g47940 LOC_Os10g25780 LOC_Os11g40100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04250.1 |
| Rice Genome Annotation | LOC_Os06g04250.1 |
| Ricechip | LOC_Os06g04250.1 |
| KEGG | osa:4340024 dosa:Os06t0133600-01 |
| Entrez-Gene | 4340024 |