RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04290.1 View Network Show in Genome Browser |
| Other Names | Os06g0134000 |
| Description | S10/S20 domain containing ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1820084-1822078 Nucleotide Length: 387 |
| Protein-coding | LOC_Os06g04290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60400 LOC_Os01g61814 LOC_Os03g58430 LOC_Os02g27760 LOC_Os03g38000 LOC_Os03g08020 LOC_Os02g06700 LOC_Os02g33140 LOC_Os02g14059 LOC_Os01g10820 LOC_Os05g11710 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os07g08660 LOC_Os12g38000 LOC_Os07g41750 LOC_Os07g10720 LOC_Os09g08430 LOC_Os08g41810 LOC_Os06g35730 LOC_Os08g10608 LOC_Os09g31180 LOC_Os11g05562 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04290.1 |
| Rice Genome Annotation | LOC_Os06g04290.1 |
| Ricechip | LOC_Os06g04290.1 |
| KEGG | osa:4340027 dosa:Os06t0134000-01 |
| Entrez-Gene | 4340027 |