RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04399.1 View Network Show in Genome Browser |
| Other Names | Os06g0135000 |
| Description | hypersensitive-induced reaction protein 4, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1880536-1891111 Nucleotide Length: 162 |
| Protein-coding | LOC_Os06g04399 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g22960 LOC_Os05g26954 LOC_Os03g12670 LOC_Os03g06420 LOC_Os03g27840 LOC_Os05g05530 |
| Downstream Genes | LOC_Os09g03310 LOC_Os06g22829 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04399.1 |
| Rice Genome Annotation | LOC_Os06g04399.1 |
| Ricechip | LOC_Os06g04399.1 |
| KEGG | osa:9270731 dosa:Os06t0135000-01 |
| Entrez-Gene | 9270731 |