RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04500.2 View Network Show in Genome Browser |
| Other Names | Os06g0136500 |
| Description | cornichon protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1927845-1930883 Nucleotide Length: 339 |
| Protein-coding | LOC_Os06g04500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23620 LOC_Os03g10850 LOC_Os03g50940 LOC_Os03g11100 LOC_Os03g61100 LOC_Os05g28950 LOC_Os02g52920 LOC_Os01g47540 LOC_Os03g63710 LOC_Os05g44310 LOC_Os01g23590 More.. |
| Downstream Genes | LOC_Os12g37360 LOC_Os06g12090 LOC_Os06g44030 LOC_Os11g24560 LOC_Os10g19190 LOC_Os06g10340 LOC_Os07g41180 LOC_Os09g34970 LOC_Os06g10760 LOC_Os06g36990 LOC_Os08g15040 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04500.2 |
| Rice Genome Annotation | LOC_Os06g04500.2 |
| Ricechip | LOC_Os06g04500.2 |
| KEGG | osa:4340041 dosa:Os06t0136500-01 |
| Entrez-Gene | 4340041 |