RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04530.1 View Network Show in Genome Browser |
| Other Names | Os06g0136800 |
| Description | OsClp9 - Putative Clp protease homologue, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 1949424-1953325 Nucleotide Length: 894 |
| Protein-coding | LOC_Os06g04530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19150 LOC_Os01g66330 LOC_Os02g35630 LOC_Os05g45750 LOC_Os01g54040 LOC_Os05g44590 LOC_Os03g19350 LOC_Os05g51450 LOC_Os02g02860 LOC_Os01g16530 LOC_Os03g61260 More.. |
| Downstream Genes | LOC_Os06g20320 LOC_Os09g36300 LOC_Os07g48960 LOC_Os12g32790 LOC_Os12g32710 LOC_Os06g46930 LOC_Os07g30800 LOC_Os11g45780 LOC_Os11g05552 LOC_Os07g30200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04530.1 |
| Rice Genome Annotation | LOC_Os06g04530.1 |
| Ricechip | LOC_Os06g04530.1 |
| KEGG | osa:4340044 dosa:Os06t0136800-01 |
| Entrez-Gene | 4340044 |