RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04600.1 View Network Show in Genome Browser |
| Other Names | Os06g0137500 |
| Description | Brix domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2000610-2009076 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os06g04600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22350 LOC_Os03g25620 LOC_Os01g33030 LOC_Os02g37870 LOC_Os03g61560 LOC_Os03g49210 LOC_Os05g48422 LOC_Os03g58810 LOC_Os01g27730 LOC_Os04g51630 LOC_Os01g67134 More.. |
| Downstream Genes | LOC_Os07g16950 LOC_Os11g16580 LOC_Os06g09570 LOC_Os07g01920 LOC_Os07g40930 LOC_Os12g29660 LOC_Os10g35280 LOC_Os07g25440 LOC_Os07g10350 LOC_Os07g47420 LOC_Os08g32090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04600.1 |
| Rice Genome Annotation | LOC_Os06g04600.1 |
| Ricechip | LOC_Os06g04600.1 |
| KEGG | osa:4340048 dosa:Os06t0137500-02 |
| Entrez-Gene | 4340048 |