RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04660.1 View Network Show in Genome Browser |
| Other Names | Os06g0138200 |
| Description | oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2030467-2034813 Nucleotide Length: 1851 |
| Protein-coding | LOC_Os06g04660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67860 LOC_Os05g33380 LOC_Os03g46650 LOC_Os01g31770 LOC_Os02g58070 LOC_Os01g08570 LOC_Os05g41010 LOC_Os03g58890 LOC_Os04g27850 LOC_Os03g58880 LOC_Os03g07000 More.. |
| Downstream Genes | LOC_Os06g40640 LOC_Os10g08022 LOC_Os10g28410 LOC_Os10g35470 LOC_Os10g27340 LOC_Os07g09630 LOC_Os08g02700 LOC_Os07g42180 LOC_Os07g18050 LOC_Os06g48750 LOC_Os08g26490 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04660.1 |
| Rice Genome Annotation | LOC_Os06g04660.1 |
| Ricechip | LOC_Os06g04660.1 |
| KEGG | osa:4340053 dosa:Os06t0138200-01 |
| Entrez-Gene | 4340053 |