RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04820.1 View Network Show in Genome Browser |
| Other Names | Os06g0140100 |
| Description | leucine carboxyl methyltransferase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2100054-2105394 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os06g04820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40740 LOC_Os02g57690 LOC_Os03g61930 LOC_Os02g12600 LOC_Os03g07150 LOC_Os03g59060 LOC_Os02g35060 LOC_Os02g18830 LOC_Os01g70800 |
| Downstream Genes | LOC_Os12g35560 LOC_Os10g27050 LOC_Os12g01060 LOC_Os11g01074 LOC_Os12g35350 LOC_Os11g43590 LOC_Os09g30210 LOC_Os12g09280 LOC_Os11g40140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04820.1 |
| Rice Genome Annotation | LOC_Os06g04820.1 |
| Ricechip | LOC_Os06g04820.1 |
| KEGG | osa:4340066 dosa:Os06t0140100-01 |
| Entrez-Gene | 4340066 |