RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04900.1 View Network Show in Genome Browser |
| Other Names | Os06g0141100 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2154708-2156716 Nucleotide Length: 1563 |
| Protein-coding | LOC_Os06g04900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g14110 LOC_Os01g38680 LOC_Os04g42490 LOC_Os03g17700 LOC_Os05g01560 LOC_Os02g34510 LOC_Os01g42430 LOC_Os04g51820 LOC_Os02g07830 More.. |
| Downstream Genes | LOC_Os06g21950 LOC_Os06g35540 LOC_Os11g42160 LOC_Os06g06090 LOC_Os11g06890 LOC_Os08g08070 LOC_Os07g37320 LOC_Os07g01560 LOC_Os09g12590 LOC_Os09g24924 LOC_Os10g41190 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04900.1 |
| Rice Genome Annotation | LOC_Os06g04900.1 |
| Ricechip | LOC_Os06g04900.1 |
| KEGG | osa:4340074 dosa:Os06t0141100-00 |
| Entrez-Gene | 4340074 |