RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g04910.1 View Network Show in Genome Browser |
| Other Names | Os06g0141166 |
| Description | hydrolase, NUDIX family protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2157495-2160576 Nucleotide Length: 1218 |
| Protein-coding | LOC_Os06g04910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59580 LOC_Os02g32060 LOC_Os02g50130 LOC_Os04g46280 LOC_Os06g03910 LOC_Os04g58900 LOC_Os02g56210 LOC_Os02g55030 LOC_Os04g58640 LOC_Os05g34180 LOC_Os04g01300 More.. |
| Downstream Genes | LOC_Os08g28840 LOC_Os07g36190 LOC_Os11g32750 LOC_Os07g11120 LOC_Os08g28860 LOC_Os12g10850 LOC_Os06g14420 LOC_Os06g42790 LOC_Os12g10910 LOC_Os12g32250 LOC_Os08g04310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g04910.1 |
| Rice Genome Annotation | LOC_Os06g04910.1 |
| Ricechip | LOC_Os06g04910.1 |
| KEGG | dosa:Os06t0141166-00 |