RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05110.3 View Network Show in Genome Browser |
| Other Names | Os06g0143000 |
| Description | superoxide dismutase, chloroplast, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2256854-2261000 Nucleotide Length: 630 |
| Protein-coding | LOC_Os06g05110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08480 LOC_Os01g13950 LOC_Os03g63420 LOC_Os01g34620 LOC_Os01g07950 LOC_Os01g11370 LOC_Os01g49219 |
| Downstream Genes | LOC_Os12g07650 LOC_Os10g35720 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05110.3 |
| Rice Genome Annotation | LOC_Os06g05110.3 |
| Ricechip | LOC_Os06g05110.3 |
| KEGG | osa:4340091 dosa:Os06t0143000-01 |
| Entrez-Gene | 4340091 |