RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05130.1 View Network Show in Genome Browser |
| Other Names | Os06g0143400 |
| Description | myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2274692-2279529 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os06g05130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g18410 LOC_Os02g58080 LOC_Os06g03540 LOC_Os03g18890 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00061 rn01100 |
| Metacyc Pathways | PWY-5142 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05130.1 |
| Rice Genome Annotation | LOC_Os06g05130.1 |
| Ricechip | LOC_Os06g05130.1 |
| KEGG | osa:4340093 dosa:Os06t0143400-01 |
| Entrez-Gene | 4340093 |