RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05190.1 View Network Show in Genome Browser |
| Other Names | Os06g0144000 |
| Description | BRCA1 C Terminus domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2329883-2334474 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os06g05190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13870 LOC_Os01g71256 LOC_Os04g43300 LOC_Os04g51700 LOC_Os03g49210 LOC_Os05g43610 LOC_Os02g32860 |
| Downstream Genes | LOC_Os11g08660 LOC_Os07g49010 LOC_Os08g31930 LOC_Os11g31890 LOC_Os11g36390 LOC_Os06g47580 LOC_Os07g23110 LOC_Os09g26870 LOC_Os07g32900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05190.1 |
| Rice Genome Annotation | LOC_Os06g05190.1 |
| Ricechip | LOC_Os06g05190.1 |
| KEGG | osa:4340098 dosa:Os06t0144000-01 |
| Entrez-Gene | 4340098 |