RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05209.1 View Network Show in Genome Browser |
| Other Names | Os06g0144200 |
| Description | pectate lyase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2336429-2338189 Nucleotide Length: 1353 |
| Protein-coding | LOC_Os06g05209 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32740 LOC_Os04g01150 LOC_Os05g46740 |
| Downstream Genes | LOC_Os06g05272 LOC_Os07g34130 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05209.1 |
| Rice Genome Annotation | LOC_Os06g05209.1 |
| Ricechip | LOC_Os06g05209.1 |
| KEGG | osa:4340099 dosa:Os06t0144200-01 |
| Entrez-Gene | 4340099 |