RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05240.1 View Network Show in Genome Browser |
| Other Names | Os06g0144600 |
| Description | zinc carboxypeptidase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2358308-2365540 Nucleotide Length: 1053 |
| Protein-coding | LOC_Os06g05240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02710 LOC_Os05g23260 LOC_Os01g68324 LOC_Os06g04510 LOC_Os03g14450 LOC_Os05g03740 LOC_Os04g51320 LOC_Os01g40570 LOC_Os01g46580 LOC_Os04g50990 LOC_Os02g47140 More.. |
| Downstream Genes | LOC_Os06g16260 LOC_Os06g43650 LOC_Os10g08550 LOC_Os11g26850 LOC_Os07g49520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05240.1 |
| Rice Genome Annotation | LOC_Os06g05240.1 |
| Ricechip | LOC_Os06g05240.1 |
| KEGG | osa:4340100 dosa:Os06t0144600-01 |
| Entrez-Gene | 4340100 |