RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05250.3 View Network Show in Genome Browser |
| Other Names | Os06g0144800 |
| Description | GTP-binding protein GUF1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2368985-2372121 Nucleotide Length: 1443 |
| Protein-coding | LOC_Os06g05250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55640 LOC_Os02g16709 LOC_Os01g08200 LOC_Os05g49220 LOC_Os03g02970 LOC_Os01g48690 LOC_Os04g43050 LOC_Os05g18850 LOC_Os02g10510 LOC_Os01g68120 LOC_Os03g38740 More.. |
| Downstream Genes | LOC_Os09g28000 LOC_Os08g10649 LOC_Os12g41400 LOC_Os12g07740 LOC_Os08g33340 LOC_Os12g17070 LOC_Os11g40500 LOC_Os08g42560 LOC_Os10g34430 LOC_Os09g24200 LOC_Os08g36140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05250.3 |
| Rice Genome Annotation | LOC_Os06g05250.3 |
| Ricechip | LOC_Os06g05250.3 |
| KEGG | osa:4340102 dosa:Os06t0144800-01 |
| Entrez-Gene | 4340102 |