RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05350.1 View Network Show in Genome Browser |
| Other Names | Os06g0145800 |
| Description | whirly transcription factor domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2405409-2408752 Nucleotide Length: 819 |
| Protein-coding | LOC_Os06g05350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34840 LOC_Os01g50960 |
| Downstream Genes | LOC_Os06g48600 LOC_Os11g23790 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05350.1 |
| Rice Genome Annotation | LOC_Os06g05350.1 |
| Ricechip | LOC_Os06g05350.1 |
| KEGG | osa:4340109 dosa:Os06t0145800-00 |
| Entrez-Gene | 4340109 |