RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05520.1 View Network Show in Genome Browser |
| Other Names | Os06g0147800 |
| Description | OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2498847-2502901 Nucleotide Length: 1059 |
| Protein-coding | LOC_Os06g05520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os03g17700 LOC_Os02g15594 LOC_Os02g36940 LOC_Os03g58580 LOC_Os02g36950 LOC_Os04g56450 LOC_Os04g37904 LOC_Os02g05480 LOC_Os01g74200 LOC_Os01g58730 More.. |
| Downstream Genes | LOC_Os06g48300 LOC_Os06g06090 LOC_Os06g33549 LOC_Os09g37600 LOC_Os08g06060 LOC_Os07g32380 LOC_Os09g22450 LOC_Os06g33530 LOC_Os06g48590 LOC_Os09g27830 LOC_Os06g06180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05520.1 |
| Rice Genome Annotation | LOC_Os06g05520.1 |
| Ricechip | LOC_Os06g05520.1 |
| KEGG | osa:4340126 dosa:Os06t0147800-01 |
| Entrez-Gene | 4340126 |