RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05550.1 View Network Show in Genome Browser |
| Other Names | Os06g0148200 |
| Description | GDSL-like lipase/acylhydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2515760-2517940 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os06g05550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38570 LOC_Os03g50810 LOC_Os02g15690 LOC_Os02g53200 LOC_Os04g57800 LOC_Os04g01230 LOC_Os01g42520 LOC_Os02g19640 LOC_Os02g44630 LOC_Os03g08790 LOC_Os05g20930 More.. |
| Downstream Genes | LOC_Os11g44810 LOC_Os08g39550 LOC_Os07g38530 LOC_Os08g39490 LOC_Os10g25780 LOC_Os08g35090 LOC_Os11g43750 LOC_Os10g26670 LOC_Os10g40420 LOC_Os06g35970 LOC_Os09g39410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05550.1 |
| Rice Genome Annotation | LOC_Os06g05550.1 |
| Ricechip | LOC_Os06g05550.1 |
| KEGG | osa:4340128 dosa:Os06t0148200-01 |
| Entrez-Gene | 4340128 |