RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05800.2 View Network Show in Genome Browser |
| Other Names | Os06g0151200 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2635898-2641379 Nucleotide Length: 900 |
| Protein-coding | LOC_Os06g05800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21940 LOC_Os04g58180 LOC_Os04g44700 LOC_Os02g42590 LOC_Os02g48340 LOC_Os03g02440 LOC_Os02g02424 LOC_Os02g53520 LOC_Os01g55549 LOC_Os04g48010 LOC_Os05g33040 More.. |
| Downstream Genes | LOC_Os11g04950 LOC_Os12g04940 LOC_Os11g08400 LOC_Os12g07874 LOC_Os10g35220 LOC_Os10g36880 LOC_Os10g41430 LOC_Os06g41790 LOC_Os07g31140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05800.2 |
| Rice Genome Annotation | LOC_Os06g05800.2 |
| Ricechip | LOC_Os06g05800.2 |
| KEGG | osa:4340149 dosa:Os06t0151200-01 |
| Entrez-Gene | 4340149 |