RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05804.1 View Network Show in Genome Browser |
| Other Names | Os06g0151300 |
| Description | trafficking protein particle complex subunit 4, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2642290-2645274 Nucleotide Length: 432 |
| Protein-coding | LOC_Os06g05804 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28400 LOC_Os01g51220 LOC_Os02g40000 LOC_Os04g42500 LOC_Os03g51600 LOC_Os01g55040 LOC_Os04g53240 LOC_Os04g51630 LOC_Os03g11970 LOC_Os01g51380 LOC_Os03g03610 More.. |
| Downstream Genes | LOC_Os09g06970 LOC_Os07g19060 LOC_Os07g44790 LOC_Os07g05580 LOC_Os07g12650 LOC_Os11g14220 LOC_Os06g08380 LOC_Os07g38730 LOC_Os08g09240 LOC_Os06g37180 LOC_Os08g13690 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05804.1 |
| Rice Genome Annotation | LOC_Os06g05804.1 |
| Ricechip | LOC_Os06g05804.1 |
| KEGG | osa:9266914 dosa:Os06t0151300-01 |
| Entrez-Gene | 9266914 |