RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05870.1 View Network Show in Genome Browser |
| Other Names | Os06g0152000 |
| Description | dual specificity protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2678974-2683781 Nucleotide Length: 816 |
| Protein-coding | LOC_Os06g05870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26954 LOC_Os03g11520 LOC_Os03g36419 LOC_Os02g46450 LOC_Os06g05860 LOC_Os05g05440 LOC_Os03g08284 LOC_Os01g21420 LOC_Os03g01940 LOC_Os05g48790 LOC_Os02g08140 More.. |
| Downstream Genes | LOC_Os12g09120 LOC_Os12g21890 LOC_Os12g23190 LOC_Os09g05020 LOC_Os09g03310 LOC_Os11g11070 LOC_Os08g29160 LOC_Os07g28910 LOC_Os10g34040 LOC_Os08g41850 LOC_Os06g37570 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4041 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05870.1 |
| Rice Genome Annotation | LOC_Os06g05870.1 |
| Ricechip | LOC_Os06g05870.1 |
| KEGG | osa:4340154 dosa:Os06t0152000-01 |
| Entrez-Gene | 4340154 |