RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05880.1 View Network Show in Genome Browser |
| Other Names | Os06g0152100 |
| Description | profilin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2690213-2693052 Nucleotide Length: 396 |
| Protein-coding | LOC_Os06g05880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46770 LOC_Os05g01600 LOC_Os01g73310 LOC_Os03g50290 LOC_Os01g46610 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os03g61970 LOC_Os03g40920 LOC_Os03g51250 More.. |
| Downstream Genes | LOC_Os06g08005 LOC_Os06g07969 LOC_Os06g07905 LOC_Os06g07869 LOC_Os08g17820 LOC_Os07g12200 LOC_Os07g12170 LOC_Os11g06390 LOC_Os08g18110 LOC_Os10g36650 LOC_Os11g43900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05880.1 |
| Rice Genome Annotation | LOC_Os06g05880.1 |
| Ricechip | LOC_Os06g05880.1 |
| KEGG | osa:4340155 dosa:Os06t0152100-01 |
| Entrez-Gene | 4340155 |