RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05910.1 View Network Show in Genome Browser |
| Other Names | Os06g0152400 |
| Description | methyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2706062-2709710 Nucleotide Length: 555 |
| Protein-coding | LOC_Os06g05910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51490 LOC_Os03g06200 LOC_Os04g57790 LOC_Os05g09650 LOC_Os02g56100 LOC_Os01g74520 LOC_Os06g04280 LOC_Os03g62260 LOC_Os04g42930 LOC_Os01g70990 LOC_Os05g45920 More.. |
| Downstream Genes | LOC_Os12g10200 LOC_Os12g28270 LOC_Os07g23169 LOC_Os07g20150 LOC_Os07g10600 LOC_Os06g07210 LOC_Os08g45140 LOC_Os11g43530 LOC_Os10g34170 LOC_Os07g06600 LOC_Os06g12030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05910.1 |
| Rice Genome Annotation | LOC_Os06g05910.1 |
| Ricechip | LOC_Os06g05910.1 |
| KEGG | osa:4340158 dosa:Os06t0152400-01 |
| Entrez-Gene | 4340158 |