RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g05980.2 View Network Show in Genome Browser |
| Other Names | Os06g0153200 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2743714-2749242 Nucleotide Length: 846 |
| Protein-coding | LOC_Os06g05980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g07870 LOC_Os05g15160 LOC_Os01g07730 LOC_Os05g03070 LOC_Os03g17740 LOC_Os05g02490 LOC_Os03g02670 LOC_Os05g23440 LOC_Os05g08370 LOC_Os05g45210 LOC_Os04g59550 More.. |
| Downstream Genes | LOC_Os08g25624 LOC_Os09g12600 LOC_Os06g39260 LOC_Os06g08860 LOC_Os07g38610 LOC_Os07g34006 LOC_Os07g33954 LOC_Os07g33910 LOC_Os08g08840 LOC_Os08g42720 LOC_Os06g33210 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g05980.2 |
| Rice Genome Annotation | LOC_Os06g05980.2 |
| Ricechip | LOC_Os06g05980.2 |
| KEGG | osa:4340163 dosa:Os06t0153200-02 |
| Entrez-Gene | 4340163 |