RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06350.1 View Network Show in Genome Browser |
| Other Names | Os06g0158000 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2949764-2957842 Nucleotide Length: 1959 |
| Protein-coding | LOC_Os06g06350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g25310 LOC_Os01g51170 LOC_Os01g73530 LOC_Os05g01700 |
| Downstream Genes | LOC_Os12g07110 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00071 rn01100 |
| Metacyc Pathways | PWY-5143 PWY-5136 FAO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06350.1 |
| Rice Genome Annotation | LOC_Os06g06350.1 |
| Ricechip | LOC_Os06g06350.1 |
| KEGG | osa:4340187 dosa:Os06t0158000-01 |
| Entrez-Gene | 4340187 |