RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06380.1 View Network Show in Genome Browser |
| Other Names | Os06g0158300 |
| Description | NBS-LRR type disease resistance protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2973521-2979496 Nucleotide Length: 2865 |
| Protein-coding | LOC_Os06g06380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34770 LOC_Os02g25080 LOC_Os03g55290 LOC_Os04g49980 |
| Downstream Genes | LOC_Os08g44750 LOC_Os09g34190 LOC_Os07g43240 LOC_Os06g37430 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06380.1 |
| Rice Genome Annotation | LOC_Os06g06380.1 |
| Ricechip | LOC_Os06g06380.1 |
| KEGG | osa:4340190 dosa:Os06t0158300-01 |
| Entrez-Gene | 4340190 |