RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06410.1 View Network Show in Genome Browser |
| Other Names | Os06g0158600 |
| Description | rRNA-processing protein FCF, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 2992045-2995594 Nucleotide Length: 639 |
| Protein-coding | LOC_Os06g06410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37770 LOC_Os03g58340 LOC_Os03g22880 LOC_Os01g51620 LOC_Os03g23020 LOC_Os03g03710 LOC_Os02g56020 LOC_Os03g02420 LOC_Os05g33260 LOC_Os02g49780 LOC_Os02g12740 More.. |
| Downstream Genes | LOC_Os10g31520 LOC_Os11g01420 LOC_Os06g12990 LOC_Os12g01430 LOC_Os08g31810 LOC_Os07g47580 LOC_Os09g35670 LOC_Os11g34200 LOC_Os08g45040 LOC_Os11g37080 LOC_Os07g29320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06410.1 |
| Rice Genome Annotation | LOC_Os06g06410.1 |
| Ricechip | LOC_Os06g06410.1 |
| KEGG | osa:4340192 dosa:Os06t0158600-01 |
| Entrez-Gene | 4340192 |