RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06440.1 View Network Show in Genome Browser |
| Other Names | Os06g0158900 |
| Description | ABC transporter, ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3001105-3009250 Nucleotide Length: 4425 |
| Protein-coding | LOC_Os06g06440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g10730 LOC_Os03g62850 LOC_Os04g52900 |
| Downstream Genes | LOC_Os10g10360 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2868 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06440.1 |
| Rice Genome Annotation | LOC_Os06g06440.1 |
| Ricechip | LOC_Os06g06440.1 |
| KEGG | osa:4340195 dosa:Os06t0158900-00 |
| Entrez-Gene | 4340195 |