RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06490.3 View Network Show in Genome Browser |
| Other Names | Os06g0159900 |
| Description | U-box domain containing heat shock protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3051247-3055709 Nucleotide Length: 630 |
| Protein-coding | LOC_Os06g06490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16860 LOC_Os01g62290 LOC_Os02g54130 LOC_Os01g56180 LOC_Os02g56900 LOC_Os03g57340 LOC_Os02g44770 LOC_Os02g40900 LOC_Os03g07870 LOC_Os04g48030 |
| Downstream Genes | LOC_Os09g35790 LOC_Os06g30970 LOC_Os10g28340 LOC_Os08g39150 LOC_Os06g46900 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5788 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06490.3 |
| Rice Genome Annotation | LOC_Os06g06490.3 |
| Ricechip | LOC_Os06g06490.3 |
| KEGG | osa:4340201 dosa:Os06t0159900-01 |
| Entrez-Gene | 4340201 |