RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06780.1 View Network Show in Genome Browser |
| Other Names | Os06g0163300 |
| Description | harpin-induced protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3195571-3199007 Nucleotide Length: 969 |
| Protein-coding | LOC_Os06g06780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63540 LOC_Os01g16030 LOC_Os05g06720 LOC_Os01g18240 LOC_Os03g60340 |
| Downstream Genes | LOC_Os06g17390 LOC_Os09g32080 LOC_Os09g07350 LOC_Os09g36350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06780.1 |
| Rice Genome Annotation | LOC_Os06g06780.1 |
| Ricechip | LOC_Os06g06780.1 |
| KEGG | osa:4340222 dosa:Os06t0163300-01 |
| Entrez-Gene | 4340222 |